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TopKLists
Inference, Aggregation and Visualization for Top-K Ranked Lists
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1.0.8
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install.packages('TopKLists')
Monthly Downloads
241
Version
1.0.8
License
LGPL-3
Maintainer
Bastian Pfeifer
Last Published
September 1st, 2022
Functions in TopKLists (1.0.8)
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breast
Sample data from breast cancer expression
calculate.maxK
The main function for TopKInference
Kendall2Lists
Calculate modified Kendall's tau distance
compute.stream
Calculates point of degeneration j0 into noise of the Idata, applying moderate deviation-based inference
l2norm
Calculate the L2 norm
KendallMLists
KendallMLists
geo.mean
Calculate the geometric mean
deltaplot
An exploratory plot of discordance for delta selection.
Kendall.plot
Plot of the Kendall Criterion values
MC.ranks
MC based rank aggregation
init.p
Initialization method for probabilities
MC.plot
Plot of the ordered stationary probabilities
j0.multi
Function returning an overall point j0 of degeneration into noise for multiple ranked lists
prepare.idata
Prepare Idata vector of 0's and 1's
trans.matrix
Compute transition matrices
Spearman
Modified Spearman's footrule distance
Borda
Borda based rank aggregation
Borda.plot
Plot Borda's scores against ranks
aggmap
Aggregation map for the integration of truncated lists
TopKSample
Sampler to generate N top-k lists according to p
TopKSpaceSampleInput
Sample input for TopKSpace functions
TopKListsGUI
TopKListsGUI for inference and visualization
TopKLists-package
Inference, aggregation and visualization for top-
k
ranked lists
CEMC
CEMC based rank aggregation
MC
Markov chain based rank aggregation