MatrixToList

<p>edges in the matrix format used by <code>tree$edge</code>, where <code>tree</code> is a tree of class <code>phylo</code></p>

edge

Searches for phylogenetic trees that are optimal using a user-defined criterion.
Implements Profile Parsimony (Faith and Trueman, 2001) <doi:10.1080/10635150118627>, and
Successive Approximations (Farris, 1969) <doi:10.2307/2412182>.
Handles inapplicable data using the algorithm of Brazeau, Guillerme and Smith
(2019) <doi:10.1093/sysbio/syy083>.

Martin R. Smith

TreeSearch

Phylogenetic Tree Search Using Custom Optimality Criteria

Emmanuel Paradis

Klaus Schliep

Martin Brazeau

MatrixToList function

Edge matrix to edge list — MatrixToList

Edge matrix to edge list

MatrixToList: Edge matrix to edge list

Description

Usage

Arguments

Value