SplitsCompatible

<p>Logical vectors listing terminals in same order, such that
each terminal is identified as a member of the ingroup (<code>TRUE</code>) or outgroup
(<code>FALSE</code>) of the respective bipartition split.</p>

split1, split2

<p>Splits are compatible if they are concave; i.e. they can both be true
simultaneously.</p>

Searches for phylogenetic trees that are optimal using a user-defined criterion.
Implements Profile Parsimony (Faith and Trueman, 2001) <doi:10.1080/10635150118627>, and
Successive Approximations (Farris, 1969) <doi:10.2307/2412182>.
Handles inapplicable data using the algorithm of Brazeau, Guillerme and Smith
(2019) <doi:10.1093/sysbio/syy083>.

Martin R. Smith

TreeSearch

SplitsCompatible: Are splits compatible?

Description

Usage

Arguments

Value