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TreeSearch (version 0.3.2)

VisualizeMatching: Visualise a matching

Description

Depicts the bipartitions that are matched between two trees using a specified Generalized Robinson Foulds tree distance measure.

Usage

VisualizeMatching(Func, tree1, tree2, setPar = TRUE, Plot = plot.phylo,
  ...)

Arguments

Func

Function used to construct tree similarity.

tree1, tree2

Trees of class phylo, with tips labelled identically.

setPar

Logical specifying whether graphical parameters should be set to display trees side by side.

Plot

Function to use to plot trees.

Additional parameters to send to Plot.