TreeSearch (version 0.4.0)

JackLabels: Label nodes with jackknife support values

Description

Label nodes with jackknife support values

Usage

JackLabels(tree, jackTrees, add = FALSE, adj = 0, col = NULL,
  frame = "none", pos = 2L, ...)

Arguments

tree

A tree of class phylo.

jackTrees

A list or multiPhylo object containing trees generated by Jackknife().

add

Logical specifying whether to add the labels to an existing plot.

adj, col, frame, pos, …

Parameters to pass to nodelabels.

Value

A named vector specifying the proportion of jackknife trees consistent with each node in tree, as plotted.

See Also

Jackknife(): Generate trees by jackknife resampling

Examples

# NOT RUN {
library('TreeTools') # for as.phylo

# jackTrees will usually be generated with Jackknife(), but for simplicity:
jackTrees <- as.phylo(1:100, 8)

JackLabels(as.phylo(0, 8), jackTrees)

# }

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