Add full stop to end of a sentence
Drop leaves from tree
List ancestors
Leaf label interchange
Constrained neighbour-joining tree
Reduced consensus, omitting specified taxa
Force a tree to match a constraint
Paths present in reduced tree
Construct consensus trees
Generate pectinate, balanced or random trees
Which splits are compatible?
Generate a tree with a specified outgroup
Extract taxa from a matrix block
Number of leaves in a phylogenetic tree
Most recent common ancestor
Hamming distance between taxa in a phylogenetic dataset
Write Newick Tree
Data from Zhang et al. 2016
Ancestors of an edge
Identify descendant edges
Double factorial
Minimum spanning tree
Generate binary tree by collapsing polytomies
Convert between matrices and phyDat objects
Decode MorphoBank text
Renumber a tree's nodes and tips
Identify vertices retained when leaves are dropped
Number of trees one SPR step away
Reorder edges of a phylogenetic tree
Reorder tree edges and nodes
Number of trees
Rightmost character of string
Distance of each node from tree exterior
Count descendants for each node in a tree
Number of distinct splits
Sort tree
Visualize position of rogue taxa
Which node is a tree's root?
Unique integer indices for bifurcating tree topologies
Quickly sample
Renumber a tree's tips
Frequency of splits
Root or unroot a phylogenetic tree
Distributions of tips consistent with a partition pair
Generate a neighbour joining tree
Total Cophenetic Index
Produce a legend for continuous gradient scales
Label splits
Write a phylogenetic tree in Newick format
Write morphological character matrix to TNT file
Is tree rooted?
Polarize splits on a single taxon
Distances between each pair of trees
Maximum splits in an n -leaf tree
Phylogenetic information content of splitting leaves into two partitions
Number of edges incident to each node in a tree
Convert between strings and phyDat objects
Display time-calibrated tree using tip information only
Read phylogenetic characters from file
"Stemwardness" of a leaf
Calculate length of paths between each pair of vertices within tree
Read posterior tree sample produced by MrBayes
Tips contained within splits
Number of trees containing a tree
Integer representing shape of a tree
Parse TNT Tree
Probability of matching this well
Identify and remove trivial splits
Convert object to multiPhylo class
Number of rooted / unrooted tree shapes
Extract tip labels
Convert object to Splits
Colour for node support value
Print TreeNumber object
UnrootedTreesMatchingSplit
Number of trees consistent with split
Add tree to start of list
Double factorials
Remove quotation marks from a string
Random parent vector
Generate trivial trees
Sort a list of phylogenetic trees
Exclusive OR operation
Apply a function that returns 64-bit integers over a list or vector
Brewer palettes
Split matching
Natural logarithms of double factorials
Is an object a TreeNumber object?
Number of trees matching a bipartition split
Efficiently convert edge matrix to splits
TreeTools
Subset of a split on fewer leaves
Extract a subtree
Cladistic information content of a tree
Read modification time from "ape" Nexus file
Collapse nodes on a phylogenetic tree
Character information content
Convert phylogenetic tree to ClusterTable
Artificial Extinction
Clade sizes
Add a tip to a phylogenetic tree
Ancestral edge
S3 methods for ClusterTable objects
Distance between edges