TreeTools

TreeTools-package

<p>Efficient implementations of functions for the creation, 
  modification and analysis of phylogenetic trees.
  Applications include: generation of trees with specified shapes;
  rooting of trees and extraction of subtrees;
  calculation and depiction of node support;
  calculation of ancestor-descendant relationships;
  import and export of trees from Newick, Nexus (Maddison et al. 1997)
  &lt;doi:10.1093/sysbio/46.4.590&gt;,
  and TNT &lt;http://www.lillo.org.ar/phylogeny/tnt/&gt; formats;
  and
  analysis of partitions and partition information.</p>

internal

Efficient implementations of functions for the creation,
modification and analysis of phylogenetic trees.
Applications include: generation of trees with specified shapes;
rooting of trees and extraction of subtrees;
calculation and depiction of node support;
calculation of ancestor-descendant relationships;
import and export of trees from Newick, Nexus (Maddison et al. 1997)
<doi:10.1093/sysbio/46.4.590>,
and TNT <http://www.lillo.org.ar/phylogeny/tnt/> formats;
and
analysis of partitions and partition information.

Martin R. Smith

Create, Modify and Analyse Phylogenetic Trees

Emmanuel Paradis

Klaus Schliep

TreeTools-package function

TreeTools: Create, Modify and Analyse Phylogenetic Trees — TreeTools-package

TreeTools: Create, Modify and Analyse Phylogenetic Trees

TreeTools-package: TreeTools: Create, Modify and Analyse Phylogenetic Trees

Description

Arguments

See Also