
Last chance! 50% off unlimited learning
Sale ends in
as.Newick()
creates a character string representation of a phylogenetic
tree, in the Newick format, using R's internal tip numbering.
Use RenumberTips()
to ensure that the internal numbering follows the
order you expect.
as.Newick(x)# S3 method for phylo
as.Newick(x)
# S3 method for list
as.Newick(x)
# S3 method for multiPhylo
as.Newick(x)
as.Newick()
returns a character string representing tree
in Newick
format.
Object to convert to Newick format. See Usage section for supported classes.
Retain leaf labels: NewickTree()
Change R's internal numbering of leaves: RenumberTips()
Write tree to text or file: ape::write.tree()
trees <- list(BalancedTree(1:8), PectinateTree(8:1))
trees <- lapply(trees, RenumberTips, 1:8)
as.Newick(trees)
Run the code above in your browser using DataLab