powerCurves

This function generates curves indicating statistical power in Trumpet plots

Visualizes the relationship between allele frequency and effect size in genetic association studies. The input is a data frame containing association results. The output is a plot with the effect size of risk variants in the Y axis, and the allele frequency spectrum in the X axis. Corte et al (2023) <doi:10.1101/2023.04.21.23288923>.

Judit García-González

TrumpetPlots

Visualization of Genetic Association Studies

Lathan Liou

powerCurves function

<dl><dt>threshold</dt>
<dd>user-specified power level</dd>
<dt>N</dt>
<dd>sample size</dd>
<dt>alpha</dt>
<dd>significance threshold</dd>
<dt>Nfreq</dt>
<dd>Number of allele frequency data points generated to calculate the power curves</dd></dl>

Arguments

Power Curves for Trumpet Plots — powerCurves

<dl>

<dt>threshold</dt>
<dd>user-specified power level</dd>


<dt>N</dt>
<dd>sample size</dd>


<dt>alpha</dt>
<dd>significance threshold</dd>


<dt>Nfreq</dt>
<dd>Number of allele frequency data points generated to calculate the power curves</dd>

</dl>

powerCurves: Power Curves for Trumpet Plots

Description

Usage

Value

Arguments

Examples