TrustVDJ (version 0.1.0)

.ReadTrust_BarcodeReport: Read TRUST4 barcode_report file.

Description

.ReadTrust_BarcodeReport reads a barcode_report file generated by TRUST4. Note that it could be xx_barcode_report.tsv but not xx_report.tsv. (.gz supported)

Usage

.ReadTrust_BarcodeReport(barcode_report_file = NULL, verbose = TRUE)

Arguments

barcode_report_file

character. Path to barcode_report file generated by TRUST4.

verbose

logical. Print progress. Default is TRUE

Value

A VDJ information data.frame

Examples

# NOT RUN {
barcode_report_file = system.file('extdata', 'TRUST4_barcode_report.tsv.gz', package = 'TrustVDJ')
barcode_report = .ReadTrust_BarcodeReport(barcode_report_file, verbose = FALSE)
head(barcode_report)

# }