gka_allele_mutation

Allele mutation probability computation

A comprehensive educational package combining clustering algorithms with
detailed step-by-step explanations. Provides implementations of both traditional
(hierarchical, k-means) and modern (Density-Based Spatial Clustering of Applications with Noise (DBSCAN),
Gaussian Mixture Models (GMM), genetic k-means) clustering methods
as described in Ezugwu et. al., (2022) <doi:10.1016/j.engappai.2022.104743>.
Includes educational datasets highlighting different clustering challenges, based on
'scikit-learn' examples (Pedregosa et al., 2011)
<https://jmlr.csail.mit.edu/papers/v12/pedregosa11a.html>. Features detailed
algorithm explanations, visualizations, and weighted distance calculations for
enhanced learning.

Andriy Protsak Protsak

UAHDataScienceUC

Learn Clustering Techniques Through Examples and Code

Eduardo Ruiz Sabajanes

Roberto Alcantara

Juan Jose Cuadrado Gallego

Universidad de Alcala 

gka_allele_mutation function

<dl><dt>data</dt>
<dd>a set of observations, presented as a matrix-like object where
every row is a new observation. The matrix is of size <code>n</code> by <code>m</code>.</dd>
<dt>k</dt>
<dd>the number of clusters.</dd>
<dt>centers</dt>
<dd>a matrix of size <code>k</code> by <code>m</code> with the cluster centers</dd>
<dt>...</dt>
<dd>additional arguments passed to <code>proxy::dist()</code>.</dd></dl>

Arguments

Eduardo Ruiz Sabajanes, <a href="/link/eduardo.ruizs%40edu.uah.es?package=UAHDataScienceUC&version=1.0.1" data-mini-rdoc="UAHDataScienceUC::eduardo.ruizs@edu.uah.es">eduardo.ruizs@edu.uah.es</a>

Author

Allele mutation probability computation — gka_allele_mutation

<dl>

<dt>data</dt>
<dd>a set of observations, presented as a matrix-like object where
every row is a new observation. The matrix is of size <code>n</code> by <code>m</code>.</dd>


<dt>k</dt>
<dd>the number of clusters.</dd>


<dt>centers</dt>
<dd>a matrix of size <code>k</code> by <code>m</code> with the cluster centers</dd>


<dt>...</dt>
<dd>additional arguments passed to <code>proxy::dist()</code>.</dd>

</dl>

Eduardo Ruiz Sabajanes, <a href='mailto:eduardo.ruizs@edu.uah.es'>eduardo.ruizs@edu.uah.es</a>

gka_allele_mutation: Allele mutation probability computation

Description

Usage

Value

Arguments

Author