UCSCXenaTools-dynamic

.p_all_cohorts

.p_all_datasets

.p_all_datasets_n

.p_all_field_metadata

.p_cohort_samples

.p_cohort_summary

.p_dataset_fetch

.p_dataset_field

.p_dataset_field_examples

.p_dataset_field_n

.p_dataset_gene_probe_avg

.p_dataset_gene_probes_values

.p_dataset_list

.p_dataset_metadata

.p_dataset_probe_signature

.p_dataset_probe_values

.p_dataset_samples

.p_dataset_samples_ndense_matrix

.p_dataset_sources

.p_dataset_status

.p_datasets_null_rows

.p_feature_list

.p_field_codes

.p_field_metadata

.p_gene_transcripts

.p_match_fields

.p_probe_count

.p_probemap_list

.p_ref_gene_exons

.p_ref_gene_position

.p_ref_gene_range

.p_segment_data_examples

.p_segmented_data_range

.p_sparse_data

.p_sparse_data_examples

.p_sparse_data_match_field

.p_sparse_data_match_field_slow

.p_sparse_data_match_partial_field

.p_sparse_data_range

.p_transcript_expression

.xq_all_cohorts

.xq_all_datasets

.xq_all_datasets_n

.xq_all_field_metadata

.xq_cohort_samples

.xq_cohort_summary

.xq_dataset_fetch

.xq_dataset_field

.xq_dataset_field_examples

.xq_dataset_field_n

.xq_dataset_gene_probe_avg

.xq_dataset_gene_probes_values

.xq_dataset_list

.xq_dataset_metadata

.xq_dataset_probe_signature

.xq_dataset_probe_values

.xq_dataset_samples

.xq_dataset_samples_ndense_matrix

.xq_dataset_sources

.xq_dataset_status

.xq_datasets_null_rows

.xq_feature_list

.xq_field_codes

.xq_field_metadata

.xq_gene_transcripts

.xq_match_fields

.xq_probe_count

.xq_probemap_list

.xq_ref_gene_exons

.xq_ref_gene_position

.xq_ref_gene_range

.xq_segment_data_examples

.xq_segmented_data_range

.xq_sparse_data

.xq_sparse_data_examples

.xq_sparse_data_match_field

.xq_sparse_data_match_field_slow

.xq_sparse_data_match_partial_field

.xq_sparse_data_range

.xq_transcript_expression

<p>A collection of dynamically generated objects for accessing UCSC Xena data.
These objects are created when the package is loaded via <code>.onAttach</code>.</p>

Download and explore datasets from UCSC Xena data hubs, which
are a collection of UCSC-hosted public databases such as TCGA, ICGC,
TARGET, GTEx, CCLE, and others.  Databases are normalized so they can
be combined, linked, filtered, explored and downloaded.

Shixiang Wang

UCSCXenaTools

Download and Explore Datasets from UCSC Xena Data Hubs

Xue-Song Liu

Martin Morgan

Christine Stawitz

Carl Ganz

UCSCXenaTools-dynamic function

<p>Various formats depending on the object (e.g., characters, or functions).</p>

Format

UCSC Xena Dynamic Objects — UCSCXenaTools-dynamic

UCSC Xena Dynamic Objects

UCSCXenaTools-dynamic: UCSC Xena Dynamic Objects

Description

Arguments

Format