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UNDO (version 1.14.0)

gene_expression_input: Detect whether the input gene expression data are valid

Description

Check the input gene expression data to see whether they are nonempty, nonnegative, etc.

Usage

gene_expression_input(X)

Arguments

X
gene expression data matrix with row representing genes/probe sets, and column representing samples.

Value

If the input is valid, the output will be the same as the input; otherwise, if the input contains NA, the corresponding rows will be deleted. if the input contains negative value, the algorithm will stop and give error information.

Examples

Run this code
gene_expression <- matrix(runif(2000),1000,2)
valid_gene_expression <- gene_expression_input(gene_expression)

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