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VAM (version 0.5.2)

Variance-Adjusted Mahalanobis

Description

Contains logic for cell-specific gene set scoring of single cell RNA sequencing data.

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Version

Install

install.packages('VAM')

Monthly Downloads

442

Version

0.5.2

License

GPL (>= 2)

Maintainer

H Robert Frost

Last Published

March 15th, 2021

Functions in VAM (0.5.2)

vam

Variance-adjusted Mahalanobis (VAM) algorithm
vamForCollection

VAM method for multiple gene sets
createGeneSetCollection

Utility function to help create gene set collection list object
vamForSeurat

VAM wrapper for scRNA-seq data processed using the Seurat framework
VAM-package

Variance-Adjusted Mahalanobis