VanillaICE (version 1.34.0)

baumWelchUpdate: Function for updating parameters for emission probabilities

Description

This function is not meant to be called directly by the user. It is exported in the package NAMESPACE for internal use by other BioC packages.

Usage

baumWelchUpdate(param, assay_list)

Arguments

param

A container for the HMM parameters

assay_list

list of log R ratios and B allele frequencies