state,Viterbi-method

state-methods

object


The states are represented as integers: 1=homozygous deletion,
2=hemizygous deletion, 3=diploid normal heterozygosity, 4=diploid
region of homozygosity, 5=single copy gain, 6=two or more copy gain.


Hidden Markov Models for characterizing chromosomal alterations in
high throughput SNP arrays.

Robert Scharpf

VanillaICE

A Hidden Markov Model for high throughput genotyping arrays

state-methods function

The states are represented as integers: 1=homozygous deletion,
2=hemizygous deletion, 3=diploid normal heterozygosity, 4=diploid
region of homozygosity, 5=single copy gain, 6=two or more copy gain.

state-methods: Accessor for the Viterbi state path

Description

Usage

Arguments