extractCoverageForPositions


    An <code>RleList</code> like that returned by <code><a rd-options="IRanges" href="/link/coverage?package=VariantTools&version=1.14.1&to=IRanges" data-mini-rdoc="IRanges::coverage">coverage</a></code>.
  


    A <code>GRanges</code> consisting only of width-1 ranges.
  


  Gets values from an <code>RleList</code> corresponding to positions (width 1
  ranges) in a <code>GRanges</code> (or <code>VRanges</code>). The result is a
  simple atomic vector.


Tools for detecting, filtering, calling, comparing and
plotting variants.

Michael Lawrence

VariantTools

Tools for Working with Genetic Variants

extractCoverageForPositions function

An <code>RleList</code> like that returned by <code><a href="coverage" rd-options="IRanges">coverage</a></code>.

A <code>GRanges</code> consisting only of width-1 ranges.

Gets values from an <code>RleList</code> corresponding to positions (width 1
  ranges) in a <code>GRanges</code> (or <code>VRanges</code>). The result is a
  simple atomic vector.

extractCoverageForPositions: Get Coverage at Positions

Description

Usage

Arguments

Value