check_err

check_err
Generic function that stops in error if problems have been encountered, with printing of the corresponding error information.

Provides a set of utility function to prevent the spread of
utility scripts in W4M (Workflow4Metabolomics) tools, and centralize
them in a single package.
To note, some are meant to be replaced by the use of dedicated packages in the future, like
the parse_args() function: it is here only to prepare the ground for
more global changes in W4M scripts and tools.
This package is used by part of the W4M Galaxy modules, some of them
being available on the community-maintained GitHub repository for
Metabolomics' Galaxy tools <https://github.com/workflow4metabolomics/tools-metabolomics>.
See Delporte et al (2025) <doi:10.1002/cpz1.70095> for more details.

Melanie Petera

W4MRUtils

Useful Functions for Harmonized W4M Tool Development

Lain Pavot

Helge Hecht

check_err function

<dl><dt>err_stock</dt>
<dd>vector of results returned by check functions</dd></dl>

Arguments

Author

Check Errors — check_err

<dl>

<dt>err_stock</dt>
<dd>vector of results returned by check functions</dd>

</dl>

check_err: Check Errors

Description

Usage

Value

Arguments

Author