intensity_checks

Intensity checking tools to compute indices per variable,
based on the W4M 3-tables format
Original code of first function by A.Fernandes, updates by M.Petera
R functions to use in R scripts and wrappers
to make things easier
V0: script structure + first function (intens_check)

Provides a set of utility function to prevent the spread of
utility scripts in W4M (Workflow4Metabolomics) tools, and centralize
them in a single package.
To note, some are meant to be replaced by the use of dedicated packages in the future, like
the parse_args() function: it is here only to prepare the ground for
more global changes in W4M scripts and tools.
This package is used by part of the W4M Galaxy modules, some of them
being available on the community-maintained GitHub repository for
Metabolomics' Galaxy tools <https://github.com/workflow4metabolomics/tools-metabolomics>.
See Delporte et al (2025) <doi:10.1002/cpz1.70095> for more details.

Melanie Petera

W4MRUtils

Useful Functions for Harmonized W4M Tool Development

intensity_checks: Intensity checking tools for Galaxy scripting

Description

Arguments