GTOMdist

Generalized Topological Overlap Measure, taking into account interactions of higher degree.

 misc 

Functions necessary to perform Weighted Correlation Network Analysis on high-dimensional data as originally described in Horvath and Zhang (2005) <doi:10.2202/1544-6115.1128> and Langfelder and Horvath (2008) <doi:10.1186/1471-2105-9-559>. Includes functions for rudimentary data cleaning, construction of correlation networks, module identification, summarization, and relating of variables and modules to sample traits. Also includes a number of utility functions for data manipulation and visualization.

Peter Langfelder

WGCNA

Weighted Correlation Network Analysis

GTOMdist function

<dl> <dt>adjMat</dt>
<dd>adjacency matrix. See details below.</dd> <dt>degree</dt>
<dd>integer specifying the maximum degree to be calculated.</dd></dl>

Arguments

Author

Generalized Topological Overlap Measure — GTOMdist

<dl>

 <dt>adjMat</dt>
<dd>adjacency matrix. See details below.</dd>

 <dt>degree</dt>
<dd>integer specifying the maximum degree to be calculated.</dd>

</dl>

GTOMdist: Generalized Topological Overlap Measure

Description

Usage

Value

Arguments

Author

References