randIndex

Computes the Rand index, a measure of the similarity between two clusterings.

 misc 

Functions necessary to perform Weighted Correlation Network Analysis on high-dimensional data as originally described in Horvath and Zhang (2005) <doi:10.2202/1544-6115.1128> and Langfelder and Horvath (2008) <doi:10.1186/1471-2105-9-559>. Includes functions for rudimentary data cleaning, construction of correlation networks, module identification, summarization, and relating of variables and modules to sample traits. Also includes a number of utility functions for data manipulation and visualization.

Peter Langfelder

WGCNA

Weighted Correlation Network Analysis

randIndex function

<dl> <dt>tab</dt>
<dd>a matrix giving the cross-tabulation table of two clusterings.</dd> <dt>adjust</dt>
<dd>logical: should the "adjusted" version be computed?</dd></dl>

Arguments

Author

Rand index of two partitions — randIndex

<dl>

 <dt>tab</dt>
<dd>a matrix giving the cross-tabulation table of two clusterings.</dd>

 <dt>adjust</dt>
<dd>logical: should the "adjusted" version be computed?</dd>

</dl>

randIndex: Rand index of two partitions

Description

Usage

Value

Arguments

Author

References