Ecotype

The Ecotype factor identifies the genotype specifically designed for a
given ecosystem of the A. thaliana from which the studied sample comes from. We have a population of reference as well as
4 newly-described Pyrenean populations, namely:<ul>
<li>Columbia, denoted Col (originating from Poland, acts as the reference ecotype)</li>
<li>Grip, denoted Grip</li>
<li>Herran, denoted Hern</li>
<li>L&lt;U+2019&gt;Hospitalet-pr&lt;U+00E8&gt;s-l&lt;U+2019&gt;Andorre, denoted Hosp</li>
<li>Chapelle Saint Roch, denoted Roch</li>
</ul>

datasets

Datasets from the WallOmics project. Contains phenomics, metabolomics, proteomics and transcriptomics data collected from two organs of five ecotypes of the model plant Arabidopsis thaliana exposed to two temperature growth conditions. Exploratory and integrative analyses of these data are presented in Durufle et al (2020) <doi:10.1093/bib/bbaa166> and Durufle et al (2020) <doi:10.3390/cells9102249>.

Sbastien Djean

WallomicsData

Datasets for Multi-Omics Integration in a Plant Abiotic Stress
Context

S<c3><a9>bastien D<c3><a9>jean

Harold Durufl<c3><a9>

Aur<c3><a9>lie Mercadi<c3><a9>

Ecotype function

A factor with 5 levels of A. thaliana genotypes.

Ecotype: Ecotype

Description

Usage

Arguments

Format

Examples