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XMRF (version 1.0)
Markov Random Fields for High-Throughput Genetics Data
Description
Fit Markov Networks to a wide range of high-throughput genomics data.
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Version
Version
1.0
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Install
install.packages('XMRF')
Monthly Downloads
10
Version
1.0
License
GPL-2
Maintainer
Ying-Wooi Wan
Last Published
June 25th, 2015
Functions in XMRF (1.0)
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brcadat
RNA-Seq Data of BRCA Patients from TCGA
ggm.fit
Fitted Gaussian Graphical Models
plotGML
Plot Network in GML
GMS
Graphical Models Object
XMRF.Sim
Generate simulated data from XMRF models
XMRF-package
A R Package to Fit Markov Networks to High-throughput Genomics Data
lambdaMax
Maximum lambda
XMRF
Markov Random Fields for Exponential Family Distributions
processSeq
Process Sequencing Data for Poisson-based MRFs
plotNet
Plot Network
plot.GMS
Plot GMS Object