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YuGene (version 1.1.2)

YuGene: A simple approach to scale gene expression data derived from different platforms for integrated analyses

Description

YuGene is a simple method for comparison of gene expression generated across different experiments, and on different platforms; that does not require global renormalization, and is not restricted to comparison of identical probes. YuGene works on a range of microarray dataset distributions, such as between manufacturers. The resulting output allows direct comparisons of gene expression between experiments and experimental platforms.

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Version

Install

install.packages('YuGene')

Monthly Downloads

3

Version

1.1.2

License

GPL (>= 2)

Maintainer

Florian Rohart

Last Published

July 13th, 2014

Functions in YuGene (1.1.2)

pca.default

Principal Components Analysis from the mixOmics package
array

Combination of multiple array experiments
pca.YuGene

Principal component analysis for the `YuGene' class.
YuGene-package

Transforms expression datasets to cumulative proportion for comparison using YuGene transform
YuGene

YuGene: A simple method for comparing gene expression across platforms using a cumulative proportion approach.
ascorbate

Ascorbate Experiment