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ZIBseq (version 1.2)

Differential Abundance Analysis for Metagenomic Data via Zero-Inflated Beta Regression

Description

Detects abundance differences across clinical conditions. Besides, it takes the sparse nature of metagenomic data into account and handles compositional data efficiently.

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Version

Install

install.packages('ZIBseq')

Monthly Downloads

10

Version

1.2

License

GPL (>= 2)

Maintainer

Hongliang Chen

Last Published

June 14th, 2017

Functions in ZIBseq (1.2)

calc_qvalues

a function used to calculate q values
testdata

Real metagenomic data
ZIBseq-package

Identify differentially abundant features
ZIBseq

Conducts the zero-inflated beta regression based on the general count data and categorical vector outcome.