aaSEA (version 1.1.0)

getAASub: Get amino acid substitutions from multiple sequence alignment

Description

Get amino acid substitutions from multiple sequence alignment

Usage

getAASub(fileLoc)

Arguments

fileLoc

exact location of multiple sequence alignment file in "FASTA" format

Value

Returns a list of two data frames 1.Single substitutions 2.Multiple substitutions

Examples

# NOT RUN {
file = system.file("extdata", "linB_Prot_ali.fasta", package = "aaSEA")
getAASub(fileLoc = file)
# }