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abctools (version 1.1.8)

Tools for ABC Analyses

Description

Tools for approximate Bayesian computation including summary statistic selection and assessing coverage. See Nunes and Prangle (2015) and Rodrigues, Prangle and Sisson (2018) .

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Install

install.packages('abctools')

Monthly Downloads

488

Version

1.1.8

License

GPL (>= 2)

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0

Stars

6

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Maintainer

Matt Nunes

Last Published

July 25th, 2025

Functions in abctools (1.1.8)

saABC

Summary statistic construction by semi-automatic ABC
semiauto.abc

Performs semi-automatic ABC based on summary statistics regression.
mincrit

Summary statistics selection by minimizing a posterior sample measure.
recalibrationABC

ABC inference with a recalibration adjustment
combmat

table of combinations
rsse

Simulation error measures.
AS.select

Summary statistics selection using approximate sufficiency.
coal

Examples of coalescent data
nn.ent

Works out entropy of a sample.
cov.pi

Coverage property diagnostics
mc.ci

Diagnostic plots for model choice coverage output
stage2

stage2
AS.test

Test for relative approximate sufficiency between two posterior samples.
selectsumm

Generic function for selecting summary statistics in ABC inference.
abctools-package

Tools for ABC analyses