acm4r v1.0

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Align-and-Count Method comparisons of RFLP data

Fragment lengths or molecular weights from pairs of lanes are compared, and a number of matching bands are calculated using the Align-and-Count Method.

Functions in acm4r

Name Description
call_gd1 Genetic Distance 1
call_acm Align-and-Count Method comparisons of RFLP data
acmwrapall acmwrapall (acm warp all)
call_gd2 Genetic Distance 2
acm.file.exists acm.file.exists (the modified file.exists function in acm)
acm.file.checkdelete acm.file.checkdelete
call_bablbs BABLBS (Band Added Band Lost Band Substituted)
replicates.in Sample replicate file
experiments.in Sample fingerprint file
clusters Clustering
acm.file.copy acm.file.copy (the modified file.copy function in acm)
call_erra Error Analysis for 1D Electrophoresis Gels
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Details

License GPL
Type Package
Date 2013-12-20
Packaged 2013-12-26 17:44:18 UTC; sahir
NeedsCompilation no
Repository CRAN
Date/Publication 2013-12-28 06:59:21

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