actel (version 1.1.0)

res_efficiency: Calculate array efficiency for residency analysis

Description

Calculate array efficiency for residency analysis

Usage

res_efficiency(arrmoves, bio, spatial, arrays, paths, dotmat)

Arguments

arrmoves

the array movements

bio

A table with the tags and biometrics of the studied fish.

spatial

A list of spatial objects in the study area

arrays

a list containing information for each array

paths

a list containing the shortest paths between arrays with distance > 1

dotmat

A dot distance matrix

Value

A list containing:

  • absolutes: A data frame with the number of fish detected and missed at each array.

  • max.efficiency: A vector of efficiency values calculated disregarding potentially missed fish.

  • min.efficiency: A vector of efficiency values calculated taking into account potentially missed fish.

  • values.per.fish: A list containing details on the arrays that have failed for each fish.