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adSplit (version 1.38.0)

Annotation-Driven Clustering

Description

This package implements clustering of microarray gene expression profiles according to functional annotations. For each term genes are annotated to, splits into two subclasses are computed and a significance of the supporting gene set is determined.

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Version

1.38.0

License

GPL (>= 2)

Maintainer

Claudio Lottaz

Last Published

February 15th, 2017

Functions in adSplit (1.38.0)

golubKEGGSplits

Examplar splitSet

hist.splitSet

Overview Histogram for splitSets

adSplit

Annotation-Driven Splits

adSplit-internal

adSplit Internal Function

diana2means

2-Means with Hierarchical Initialization

drawRandomPS

Draw sets of probe-sets

print.split

Print Information on Single Splits

print.splitSet

Print Summaries for splitSets

randomDiana2means

Generate null-distributions of DLD-scores

makeEID2PROBESenv

Generate EID2PROBES environment

image.splitSet

Illustrate Split Sets