Usage
"pairs"(x, train.data = NULL, vars = NULL, maxvar = 10, test.x = NULL, test.y = NULL, test.only = FALSE,col=c(2,4),pch=c(1,2), ...)
varplot(x, plot.it = TRUE, type = c("none","scores"),max.var.show=30, ...)
Arguments
x
object generated by ‘ada’.
train.data
the ‘data.frame’ of the orgianal data used to train the
classifier. The names of this ‘data.frame’ must be the same as the
variable names as the object generated by ‘ada’. x.data is
used by both the ‘pairs’ command. Default = NULL.
vars
a vector of variables to include for this plot. The
variable number must correspond to a specific column in ‘x’. For
example, vars=c(1,2), generates a plot for the first two columns
for ‘x.data’. Note: vars is only used for the ‘pairs’ command.
Default = NULL.
maxvar
the maximum number of variables for the pairwise plot.
If maxvar = 5, then ‘varplot’ chooses the the five most important
variables and places these in desending order in the plot. Maxvar
is only used for the ‘pairs’ command. Default = 10.
test.x
an option to plot pairwise descriptors for a test
data set. ‘test.data’ should be of type ‘data.frame’. ‘test.data’ is only
used for the ‘pairs’ command. Default = NULL.
test.y
the corresponding response for the test data set.
If ‘test.response’ is not specified, then the color of the symbols for
the test data in the pairwise plots are black; training data are colored
by class. ‘test.response’ is only used for the ‘pairs’ command.
Default = NULL.
test.only
provides pairwise plots for test data only (test.only = TRUE).
Default = FALSE. If ‘test.response’ is not specified, then ‘test.only’ is ignored.
‘test.only’ is only used for the ‘pairs’ command. Default = NULL.
col
color for plot symbols one for each class. Defualt col=c(2,4) (i.e. red and blue)
pch
pch for plot set two symbols. Defualt pch=c(1,2) (i.e. circle and triangle)
...
Arguments to be passed into ‘pairs.default’. Do not set
the upper and lower panel. This is only used for the pairs command.
plot.it
provides a plot of frequencies for each variable (plot.it = TRUE).
‘plot.it’ is only used for the ‘varplot’ command. Default = NULL.
type
if type=“none” then nothing is returned. Default = “none”.
If type=“scores”, the frequencies are returned.
max.var.show
if plot.it is TRUE then this controls the number of variables shown for the plot