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adaptivetau (version 2.3-1)

Tau-Leaping Stochastic Simulation

Description

Implements adaptive tau leaping to approximate the trajectory of a continuous-time stochastic process as described by Cao et al. (2007) The Journal of Chemical Physics (aka. the Gillespie stochastic simulation algorithm). This package is based upon work supported by NSF DBI-0906041 and NIH K99-GM104158 to Philip Johnson and NIH R01-AI049334 to Rustom Antia.

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Install

install.packages('adaptivetau')

Monthly Downloads

795

Version

2.3-1

License

GPL (>= 3)

Issues

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Maintainer

Philip Johnson

Last Published

April 17th, 2024

Functions in adaptivetau (2.3-1)

ssa.exact

Exact stochastic simulation algorithm
ssa.maketrans

Make transition matrix
ssa.adaptivetau

Approximate stochastic simulation algorithm