ade4 (version 1.2-2)

rtest.between: Monte-Carlo Test on the between-groups inertia percentage (in R).

Description

Performs a Monte-Carlo test on the between-groups inertia percentage.

Usage

rtest.between(xtest, nrepet = 99, ...)

Arguments

xtest

an object of class between

nrepet

the number of permutations

...

further arguments passed to or from other methods

Value

• a list of the class rtest

References

Romesburg, H. C. (1985) Exploring, confirming and randomization tests. Computers and Geosciences, 11, 19--37.

Examples

data(meaudret)
pca1 <- dudi.pca(meaudret$mil, scan = FALSE, nf = 3)
rand1 <- rtest(between(pca1, meaudret$plan$dat, scan = FALSE), 99)
rand1
plot(rand1, main = "Monte-Carlo test")