ade4 (version 1.7-5)

aminoacyl: Codon usage

Description

aminoacyl is a list containing the codon counts of 36 genes encoding yeast aminoacyl-tRNA-synthetase(S.Cerevisiae).

Usage

data(aminoacyl)

Format

aminoacyl is a list containing the 5 following objects:

Source

Data prepared by D. Charif starting from: http://www.expasy.org/sprot/

References

Chiapello H., Olivier E., Landes-Devauchelle C., Nitschké P. and Risler J.L (1999) Codon usage as a tool to predict the cellular localisation of eukariotic ribosomal proteins and aminoacyl-tRNA synthetases. Nucleic Acids Res., 27, 14, 2848--2851.

Examples

data(aminoacyl)
aminoacyl$genes
aminoacyl$usage.codon
dudi.coa(aminoacyl$usage.codon, scannf = FALSE)