adegenet (version 2.0.1)

minorAllele: Compute minor allele frequency

Description

This function computes the minor allele frequency for each locus in a genind object. To test if loci are polymorphic, see the function isPoly.

Usage

minorAllele(x)

Arguments

x

a genind object

See Also

isPoly

Examples

## Not run: 
# 
# ## LOAD DATA
# data(nancycats)
# 
# ## COMPUTE ALLELE FREQUENCIES
# x <- nancycats
# apply(tab(x, freq=TRUE),2,mean, na.rm=TRUE)
# 
# ## GET MINOR ALLELE FREQUENCY
# m.freq <- minorAllele(x)
# m.freq
# ## End(Not run)