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adwave (version 1.2)

Wavelet Analysis of Genomic Data from Admixed Populations

Description

Implements wavelet-based approaches for describing population admixture. Principal Components Analysis (PCA) is used to define the population structure and produce a localized admixture signal for each individual. Wavelet summaries of the PCA output describe variation present in the data and can be related to population-level demographic processes. For more details, see Sanderson et al. (2015).

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Version

Install

install.packages('adwave')

Monthly Downloads

236

Version

1.2

License

GPL (>= 2)

Maintainer

Murray Cox

Last Published

September 14th, 2017

Functions in adwave (1.2)

wavesum

Wavelet Summaries of Localized Admixture Signals
signal

Compute Localized Admixture Signals
plotsignal

Plot Localized Admixture Signals
admix

Simulated Admixed Population Data
adwave-package

Wavelet Analysis of Genomic Data from Admixed Populations