This function
is design to be used with applyCdfGroups
()
on an Affymetrix Mapping (SNP) CDF list
structure.
Identifies the number of nucleotides (bases) in probe sequences that mismatch the the target sequence for allele A and the allele B, as used by [1].
cdfAddBaseMmCounts(groups, ...)
list
structure with groups.
Each group must contain the fields tbase
, pbase
, and
offset
(from cdfAddProbeOffsets
()).
list
structure with the same number of groups as the
groups
argument. To each group, two fields is added:
cdfAddProbeOffsets
().
applyCdfGroups
().