{"Package":"affy","Version":"1.50.0","Title":"Methods for Affymetrix Oligonucleotide Arrays","Author":"Rafael A. Irizarry , Laurent Gautier\n, Benjamin Milo Bolstad\n, and Crispin Miller\n with contributions from Magnus\nAstrand , Leslie M. Cope\n, Robert Gentleman, Jeff Gentry, Conrad\nHalling , Wolfgang Huber, James\nMacDonald , Benjamin I. P. Rubinstein,\nChristopher Workman , John Zhang","Maintainer":"Rafael A. Irizarry ","Depends":"R (>= 2.8.0), BiocGenerics (>= 0.1.12), Biobase (>= 2.5.5)","Imports":"affyio (>= 1.13.3),\nBiocInstaller, graphics, grDevices, methods, preprocessCore,\nstats, utils, zlibbioc","Suggests":"tkWidgets (>= 1.19.0), affydata, widgetTools","LinkingTo":"preprocessCore","Description":"The package contains functions for exploratory\noligonucleotide array analysis. The dependence on tkWidgets\nonly concerns few convenience functions. 'affy' is fully\nfunctional without it.","License":"LGPL (>= 2.0)","Collate":"ProgressBarText.R ppset.ttest.R ppsetApply.R expressoWidget.R\ngetCDFenv.R AffyRNAdeg.R avdiff.R barplot.ProbeSet.R\nbg.Affy.chipwide.R bg.R expresso.R fit.li.wong.R\ngenerateExprVal.method.avgdiff.R\ngenerateExprVal.method.liwong.R generateExprVal.method.mas.R\ngenerateExprVal.method.medianpolish.R\ngenerateExprVal.method.playerout.R hlog.R justrma.R\nloess.normalize.R maffy.R mas5.R merge.AffyBatch.R\nnormalize.constant.R normalize.contrasts.R\nnormalize.invariantset.R normalize.loess.R normalize.qspline.R\nnormalize.quantiles.R pairs.AffyBatch.R plot.density.R\nplotLocation.R plot.ProbeSet.R pmcorrect.mas.R AffyBatch.R\nmva.pairs.R ProbeSet.R read.affybatch.R rma.R summary.R\ntukey.biweight.R whatcdf.R xy2indices.R zzz.R","biocViews":"Microarray, OneChannel, Preprocessing","LazyLoad":"yes","readme":"","repoType":"bioconductor"}

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Examples