affy (version 1.50.0)

matplotProbesPDNN: Plot the PDNN computed probe intensities

Description

Plot the probe intensities as computed by 'pmcorrect.pdnn' or 'pmcorrect.pdnnpredict'

Usage

matplotProbesPDNN(x, type="l", ...)

Arguments

x
a matrix (and attributes) as returned by pmcorrect.pdnn or pmcorrect.pdnnpredict.
type
type of plot (same as in matplot)
...
optional arguments to be passed to matplot

Value

  • Only used for its side-effect.

Details

The crosses are the probe intensities which are considered `ok' by the outlier detection part of the algorithm, while the circles are the ones considered `outliers'

See Also

pmcorrect.pdnn and pmcorrect.pdnnpredict

Examples

Run this code
# see 'pmcorrect.pdnn'

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