Usage
probes2table(eset, probids, lib, otherdata = NULL, anncols = aaf.handler()[c(1:3, 6:7, 9:12)], html = TRUE, text = FALSE, express = TRUE, save = FALSE, filename, title = NULL)
Arguments
eset
An ExpressionSet containing Affy expression values.
probids
A vector of probe ids.
lib
An annotation package for the Affy chips used.
otherdata
A *named* list of additional information to include in the
resulting table. Examples would be t-statistics, p-values, fold change, etc.
Each list item should be a vector the same length as the probids vector. The
name associated with each list item will be used as the column name in the
resulting table.
anncols
A vector of things to annotate, produced by a call to
aaf.handler().
html
Output data in HTML tables? Defaults to TRUE.
text
Output data in text tables? Defaults to TRUE.
express
Output expression values in table? Defaults to TRUE.
save
Should tables be saved as R objects for further processing?
Defaults to FALSE.
filename
Filename of the resulting HTML table.
title
Title for HTML table. If NULL, the filename will be
used.