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affycoretools (version 1.40.5)

maplot: A Function to make MA plots from all arrays.

Description

This function creates an MA plot for all arrays in either an ExpressionSet or a matrix. A 'baseline' array is created using the median expression for each gene, and each array is then compared to the baseline array.

Usage

maplot(object, layout = NULL, ...)

Arguments

object
An ExpressionSet or matrix containing log-transformed array data.
layout
A numeric vector, length two. Best results will be obtained if both values are the same, and between 2 and 5 (e.g., c(3,3))
...
Other arguments that will be passed down to the xyplot function from the lattice package.

Value

No output. Used only for the side effect of creating MA plots.