maplot

An ExpressionSet or matrix containing log-transformed array
data.

object


This function creates an MA plot for all arrays in either an ExpressionSet
or a matrix. A 'baseline' array is created using the median expression for
each gene, and each array is then compared to the baseline array.


hplot

Various wrapper functions that have been written to
streamline the more common analyses that a core Biostatistician
might see.

James W MacDonald

affycoretools

Functions useful for those doing repetitive analyses
with Affymetrix GeneChips

maplot function

This function creates an MA plot for all arrays in either an ExpressionSet
or a matrix. A 'baseline' array is created using the median expression for
each gene, and each array is then compared to the baseline array.

maplot: A Function to make MA plots from all arrays.

Description

Usage

Arguments

Value