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agilp (version 3.8.0)

Agilent expression array processing package

Description

provides a pipeline for the low-level analysis of gene expression microarray data, primarily Agilent data

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Version

Monthly Downloads

3

Version

3.8.0

License

GPL-3

Maintainer

Benny Chain

Last Published

February 15th, 2017

Functions in agilp (3.8.0)

AALoess

Normalises a set of gene expression data files using LOESS
Equaliser

Trims a set of gene expression data files to include only the set of identifiers common to all files
filenamex

A file name listing utility
AAProcess

Extracts raw expression data from Agilent expression array scanner files.
IDswop

Mapping expression data across bioinformatic identifiers
agilp-package

Agilent expression array processing package
Baseline

Constructs a file with the mean of each probe from a set of raw expression array data files
Loader

A file choser utility file.