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'akmedoids' package

An R package for analysing and clustering longitudinal data

Description

The akmedoids package advances a set of R-functions for longitudinal clustering of long-term trajectories and determines the optimal solution based on either the average silhouette width (Rousseeuw P. J. (1987) or the Caliński-Harabatz criterion (Caliński and Harabasz 1974). The package also includes a set of functions for addressing common data issues, such as missing entries and outliers, prior to conducting advance longitudinal data analysis. One of the key objectives of this package is to facilitate easy replication of a recent paper which examined small area inequality in the crime drop (see Adepeju et al. 2019). Many of the functions provided in the akmedoids package may be applied to longitudinal data in general.

General

Many of the functions provided in the akmedoids package may be applied to longitudinal data in general.

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Version

Install

install.packages('akmedoids')

Monthly Downloads

79

Version

0.1.5

License

GPL-3

Maintainer

Monsuru Adepeju

Last Published

January 10th, 2020

Functions in akmedoids (0.1.5)

wSpaces

Whitespaces removal
rates

Conversion of counts to rates
traj

Longitudinal dataset
alphaLabel

Numerics ids to alphabetical ids
statPrint

Descriptive (Change) statistics and plots
outlierDetect

Outlier detection and replacement
population

sample population (denominator) data
akmedoids.clust

Anchored k-medoids clustering
props

Conversion of counts (or rates) to 'Proportion'
dataImputation

Data imputation for longitudinal data
elbowPoint

Determine the elbow point on a curve