combine_freq_results

Frequency estimation results of single TCR clones (usually from
the first time <code><a rd-options="" href="/link/freq_estimate?package=alphabetr&version=0.2.2" data-mini-rdoc="alphabetr::freq_estimate">freq_estimate</a></code> is called)

single

Frequency estimation results of dual TCR-alpha clones

dual


<code>combine_freq_results()</code> combines the results of the frequency estimation
performed on single TCR clones (from the output of <code><a rd-options="" href="/link/bagpipe?package=alphabetr&version=0.2.2" data-mini-rdoc="alphabetr::bagpipe">bagpipe</a></code>) and
the frequency estimation performed on dual clones. The code will find the
rows of the single TCR frequency results that are represented by the dual
clones and replace them with the appropriate dual clone entry.


Provides algorithms for frequency-based pairing of alpha-beta T
cell receptors.

Edward Lee

alphabetr

Algorithms for High-Throughput Sequencing of Antigen-Specific T
Cells

combine_freq_results function

Frequency estimation results of single TCR clones (usually from
the first time <code><a rd-options='' href='freq_estimate'>freq_estimate</a></code> is called)


<code>combine_freq_results()</code> combines the results of the frequency estimation
performed on single TCR clones (from the output of <code><a rd-options='' href='bagpipe'>bagpipe</a></code>) and
the frequency estimation performed on dual clones. The code will find the
rows of the single TCR frequency results that are represented by the dual
clones and replace them with the appropriate dual clone entry.


combine_freq_results: Combines the frequency estimation results from single TCR clones and dual TCR clones

Description

Usage

Arguments

Value