METAtables-class

METAtables

An S4 class to return results from <code>compute_amanida</code> or <code>amanida_vote</code> function

Combination of results for meta-analysis using significance
and effect size only. P-values and fold-change are combined to obtain
a global significance on each metabolite. Produces a volcano plot
summarising the relevant results from meta-analysis. Vote-counting
reports for metabolites. And explore plot to detect discrepancies
between studies at a first glance. Methodology is described in the
Llambrich et al. (2021) <doi:10.1093/bioinformatics/btab591>.

Maria Llambrich

amanida

Meta-Analysis for Non-Integral Data

Eudald Correig

Raquel Cumeras

METAtables-class function

<dl>
<dt><code>stat</code></dt>
<dd>results for statistics combining p-values and fold-changes</dd></dl>
<dt><code>vote</code></dt>
<dd>vote-counting for metabolites</dd>

Slots

An S4 class to return results from compute_amanida or amanida_vote function — METAtables-class

<dl>
<dt><code>stat</code></dt>
<dd>results for statistics combining p-values and fold-changes</dd>


<dt><code>vote</code></dt>
<dd>vote-counting for metabolites</dd>


</dl>

METAtables-class: An S4 class to return results from `compute_amanida` or `amanida_vote` function

Description

Arguments

Slots