amap (version 0.5-1)

xcluster2r: Importing Xcluster/Cluster output

Description

Converting Xcluster/Cluster output (.gtr or .atr) to R hclust file

Usage

xcluster2r(file,distance="euclidean",labels=FALSE,fast=FALSE,clean=FALSE,
           dec='.')

Value

An object of class hclust which describes the tree produced by the clustering process.

Details

See xcluster for more details.

See Also

xcluster, r2xcluster, hclust, hcluster

Examples

#    Create data
.Random.seed <- c(1,  416884367 ,1051235439)
m <- matrix(rep(1,3*24),ncol=3)  
m[9:16,3] <- 3 ; m[17:24,] <- 3    #create 3 groups
m <- m+rnorm(24*3,0,0.5)           #add noise
m <- floor(10*m)/10                #just one digits

r2xcluster(m)


# And once you have Xcluster program:
#
#system('Xcluster -f xcluster.txt -e 0 -p 0 -s 0 -l 0')
#h <- xcluster2r('xcluster.gtr')
#plot(h,hang=-1)