H_sal

Used by <code>DKI2()</code>, adjusting the Shannon diversity
index <code>H'</code> to account for decreasing species
diversity with decreasing salinity.

Calculate AZTI’s Marine Biotic Index - AMBI. The included list of
benthic fauna species according to their sensitivity
to pollution. Matching species in sample data to the list allows the
calculation of fractions of individuals in the different sensitivity
categories and thereafter the AMBI index. The Shannon Diversity Index H'
and the Danish benthic fauna quality index DKI (Dansk Kvalitetsindeks) can
also be calculated, as well as the multivariate M-AMBI index.
Borja, A., Franco, J. ,Pérez, V. (2000) "A marine biotic index to
establish the ecological quality of soft bottom benthos within European
estuarine and coastal environments" <doi:10.1016/S0025-326X(00)00061-8>.

Ciarán J. Murray

ambiR

Calculate AZTI’s Marine Biotic Index

Ángel Borja

Sarai Pouso

Iñigo Muxika

Joxe Mikel Garmendia

Steen Knudsen

GES4SEAS 

H_sal function

<dl><dt>psal</dt>
<dd>numeric salinity</dd>
<dt>intercept</dt>
<dd>numeric, default 2.117</dd>
<dt>slope</dt>
<dd>numeric default 0.086</dd></dl>

Arguments

Maximum H' as a linear function of salinity — H_sal

<dl>

<dt>psal</dt>
<dd>numeric salinity</dd>


<dt>intercept</dt>
<dd>numeric, default 2.117</dd>


<dt>slope</dt>
<dd>numeric default 0.086</dd>

</dl>

H_sal: Maximum H' as a linear function of salinity

Description

Usage

Value

Arguments

Details

Examples