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amei (version 1.0-7)

Adaptive Management of Epidemiological Interventions

Description

This package provides a flexible statistical framework for generating optimal epidemiological interventions that are designed to minimize the total expected cost of an emerging epidemic while simultaneously propagating uncertainty regarding underlying disease parameters through to the decision process via Bayesian posterior inference. The strategies produced through this framework are adaptive: vaccination schedules are iteratively adjusted to reflect the anticipated trajectory of the epidemic given the current population state and updated parameter estimates.

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Version

Install

install.packages('amei')

Monthly Downloads

20

Version

1.0-7

License

GPL

Maintainer

Robert Gramacy

Last Published

December 13th, 2013

Functions in amei (1.0-7)

plot.epiman

Plotting Epidemic Trajectories and Costs
getpolicy

Extract The Optimal Static Vaccination Policy
MCepi

Monte Carlo Epidemic Simulation with Static Vaccination
MCmanage

Monte Carlo Epidemic Simulation with Adaptive Vaccination
optvac

Optimal (Static) Vaccination Policy
plot.optvac

Plotting Vaccination Cost Surfaces
getcost

Extract the Final Costs/Number of Vaccinations of the (Managed) Epidemic
manage

Adaptive Management of Epidemiological Interventions
print.Rd

Summarizing and printing amei output
amei-package

Adaptive Management of Epidemiological Interventions
epistep

Evolve One Step of an Epidemic in Time
amei-internal

Internal amei Functions