amp.dm (version 0.2.0)

check_nmdata: Checks nonmem dataset for common errors/mistakes

Description

This function checks if there are any common errors or mistakes within a NONMEM dataset, and reports the results back to console, table or dataframe

Usage

check_nmdata(
  x,
  type = 1,
  ret = "tbl",
  capt = NULL,
  align = NULL,
  size = "\\footnotesize",
  ...
)

Value

the checks are either printed, returned as dataframe or placed in a PDF

Arguments

x

either a path to a CSV file or a data frame with the NONMEM data that should be checked

type

integer with the type of checks. Currently 1 can be used for checks that should all pass for a valid analysis and 2 for checks that trigger further investigation

ret

a character vector to define what kind of output should be returned (either "dfrm", "tbl", "file")

capt

character with the caption of the table (not used in case data frame is returned)

align

alignment of the table passed to general_tbl (not used in case data frame is returned)

size

character with font size as for the table general_tbl

...

additional arguments passed to general_tbl

Author

Richard Hooijmaijers

Examples

chkf <- system.file("example/NM.theoph.V1.csv",package = "amp.dm")
check_nmdata(chkf)